Zettergren E, Vickers D, Runnels J, Murthy SK, Lin CP, Niedre M

Instrument for fluorescence sensing of circulating cells with diffuse light in mice in vivo.
J Biomed Opt. 2012;17(3):037001 - PMID: 22502573 - PMCID: PMC3380949 - DOI: 10.1117/1.JBO.17.3.037001

Kim Y, Higgins JM, Dasari RR, Suresh S, Park Y

Anisotropic light scattering of individual sickle red blood cells.
J Biomed Opt. 2012;17(4):040501 - PMID: 22559667 - PMCID: PMC3602817 - DOI: 10.1117/1.JBO.17.4.040501

Lee S, Vinegoni C, Feruglio PF, Weissleder R

Improved intravital microscopy via synchronization of respiration and holder stabilization.
J Biomed Opt. 2012;17(9):96018-1 - PMID: 23085919 - PMCID: PMC3449295 - DOI: 10.1117/1.JBO.17.9.096018

Achilefu S, Contag CH, Savitsky AP, Weissleder R

Chemical and Genetic Sensors in Biomedical Research.
J Biomed Opt. 2005;10(4):41201 - PMID: 23171967

Pestana N, Mortensen LJ, Runnels JP, Vickers D, Murthy SK, Lin CP, Niedre M

Improved diffuse fluorescence flow cytometer prototype for high sensitivity detection of rare circulating cells in vivo.
J Biomed Opt. 2013;18(7):77002 - PMID: 23831714 - PMCID: PMC3702234 - DOI: 10.1117/1.JBO.18.7.077002

Lee S, Courties G, Nahrendorf M, Weissleder R, Vinegoni C

Motion characterization scheme to minimize motion artifacts in intravital microscopy.
J Biomed Opt. 2017;22(3):36005 - PMID: 28253383 - PMCID: PMC5333764 - DOI: 10.1117/1.JBO.22.3.036005

Pera V, Tan X, Runnels J, Sardesai N, Lin CP, Niedre M

Diffuse fluorescence fiber probe for in vivo detection of circulating cells.
J Biomed Opt. 2017;22(3):37004 - PMID: 28290598 - PMCID: PMC5348644 - DOI: 10.1117/1.JBO.22.3.037004

Patil R, Tan X, Bartosik P, Detappe A, Runnels JM, Ghobrial I, Lin CP, Niedre M

Fluorescence monitoring of rare circulating tumor cell and cluster dissemination in a multiple myeloma xenograft model in vivo.
J Biomed Opt. 2019;24(8):1-11 - PMID: 31456386 - PMCID: PMC6983486 - DOI: 10.1117/1.JBO.24.8.085004

Fumene Feruglio P, Vinegoni C, Weissleder R

Extended dynamic range imaging for noise mitigation in fluorescence anisotropy imaging.
J Biomed Opt. 2020;25(8):ePub - PMID: 32820624 - PMCID: PMC7439791 - DOI: 10.1117/1.JBO.25.8.086003

Graves EE, Yessayan D, Turner G, Weissleder R, Ntziachristos V.

Validation of in vivo fluorochrome concentrations measured using fluorescence molecular tomography
J Biomed Opt. 2005;10(4):44019 - PMID: 16178652 - DOI: 10.1117/1.1993427

Ntziachristos V, Turner G, Dunham J, Windsor S, Soubret A, Ripoll J, Shih HA

Planar fluorescence imaging using normalized data.
J Biomed Opt. 2005;10(6):64007 - PMID: 16409072 - DOI: 10.1117/1.2136148

Pande AN, Kohler RH, Aikawa E, Weissleder R, Jaffer FA

Detection of macrophage activity in atherosclerosis in vivo using multichannel, high-resolution laser scanning fluorescence microscopy.
J Biomed Opt. 2006;11(2):21009 - PMID: 16674184 - DOI: 10.1117/1.2186337

Hsiao JK, Law B, Weissleder R, Tung CH

In-vivo imaging of tumor associated urokinase-type plasminogen activator activity.
J Biomed Opt. 2006;11(3):34013 - PMID: 16822063 - DOI: 10.1117/1.2204029

Niedre MJ, Turner GM, Ntziachristos V

Time-resolved imaging of optical coefficients through murine chest cavities.
J Biomed Opt. 2006;11(6):064017 - PMID: 17212540 - DOI: 10.1117/1.2400702

Kim P, Puoris'haag M, Cote D, Lin CP, Yun SH

In vivo confocal and multiphoton microendoscopy.
J Biomed Opt. 2008;13(1):010501 - PMID: 18315346 - PMCID: PMC2752311 - DOI: 10.1117/1.2839043

Deliolanis NC, Kasmieh R, Wurdinger T, Tannous BA, Shah K, Ntziachristos V

Performance of the red-shifted fluorescent proteins in deep-tissue molecular imaging applications.
J Biomed Opt. 2008;13(4):044008 - PMID: 19021336 - PMCID: PMC2749214 - DOI: 10.1117/1.2967184

Tung CH

Fluorescent peptide probes for in vivo diagnostic imaging.
Biopolymers. 2004;76(5):391-403 - PMID: 15389488 - DOI: 10.1002/bip.20139

Liu X, Nielsen GP, Rosenberg AE, Waterman PR, Yang W, Choy E, Sassi S, Yang S, Harmon DC, Yang C, Schwab JH, Kobayashi E, Mankin HJ, Xavier R, Weissleder R, Duan Z, Hornicek FJ

Establishment and characterization of a novel chordoma cell line: CH22.
J Orthop Res. 2012;30(10):1666-73 - PMID: 22504929 - DOI: 10.1002/jor.22113

Guimaraes AR, Ross R, Figuereido JL, Waterman P, Weissleder R

MRI with Magnetic Nanoparticles Monitors Downstream Anti-Angiogenic Effects of mTOR Inhibition.
Mol Imaging Biol. 2011;13(2):314-20 - PMID: 20559742 - DOI: 10.1007/s11307-010-0357-2

Thurber GM, Weissleder R

Quantitating Antibody Uptake In Vivo: Conditional Dependence on Antigen Expression Levels.
Mol Imaging Biol. 2011;13(4):623-32 - PMID: 20809210 - PMCID: PMC3000888 - DOI: 10.1007/s11307-010-0397-7

Querol Sans M*, Chen JW*, Weissleder R, Bogdanov AA

Myeloperoxidase Activity Imaging Using (67)Ga Labeled Substrate.
Mol Imaging Biol. 2005;7(6):403-10 - PMID: 16292477 - DOI: 10.1007/s11307-005-0020-5

Kelly KA, Nahrendorf M, Yu AM, Reynolds F, Weissleder R

In Vivo Phage Display Selection Yields Atherosclerotic Plaque Targeted Peptides for Imaging.
Mol Imaging Biol. 2006;8(4):201-7 - PMID: 16791746 - DOI: 10.1007/s11307-006-0043-6

Saxena A, Kessinger CW, Thompson B, McCarthy JR, Iwamoto Y, Lin CP, Jaffer FA

High-Resolution Optical Mapping of Inflammatory Macrophages Following Endovascular Arterial Injury.
Mol Imaging Biol. 2013;15(3):282-9 - PMID: 23090852 - PMCID: PMC3650124 - DOI: 10.1007/s11307-012-0599-2

Lartey FM, Ahn GO, Shen B, Cord KT, Smith T, Chua JY, Rosenblum S, Liu H, James ML, Chernikova S, Lee SW, Pisani LJ, Tirouvanziam R, Chen JW, Palmer TD, Chin FT, Guzman R, Graves EE, Loo BW

PET Imaging of Stroke-Induced Neuroinflammation in Mice Using [(18)F]PBR06.
Mol Imaging Biol. 2013;16(1):109-17 - PMID: 23836504 - PMCID: PMC4141125 - DOI: 10.1007/s11307-013-0664-5

Lartey FM, Ahn GO, Ali R, Rosenblum S, Miao Z, Arksey N, Shen B, Colomer MV, Rafat M, Liu H, Alejandre-Alcazar MA, Chen JW, Palmer T, Chin FT, Guzman R, Loo BW, Graves E

The Relationship Between Serial [(18) F]PBR06 PET Imaging of Microglial Activation and Motor Function Following Stroke in Mice.
Mol Imaging Biol. 2014;16(6):821-9 - PMID: 24865401 - PMCID: PMC4237703 - DOI: 10.1007/s11307-014-0745-0

Carlucci G, Carney B, Brand C, Kossatz S, Irwin CP, Carlin SD, Keliher EJ, Weber W, Reiner T

Dual-Modality Optical/PET Imaging of PARP1 in Glioblastoma.
Mol Imaging Biol. 2015;17(6):848-55 - PMID: 25895168 - PMCID: PMC4609241 - DOI: 10.1007/s11307-015-0858-0

Davis RW, Eggleston H, Johnson F, Nahrendorf M, Bock PE, Peterson T, Panizzi P

In Vivo Tracking of Streptococcal Infections of Subcutaneous Origin in a Murine Model.
Mol Imaging Biol. 2015;17(6):793-801 - PMID: 25921659 - PMCID: PMC4807872 - DOI: 10.1007/s11307-015-0856-2

Mazitschek R, Baumhof P, Giannis A

Peptidomimetics and angiogenesis.
Mini Rev Med Chem. 2002;2(5):491-506 - PMID: 12370049 - DOI: 10.2174/1389557023405710

Spear MA, Herrlinger U, Rainov N, Pechan P, Weissleder R, Breakefield XO

Targeting gene therapy vectors to CNS malignancies.
J Neurovirol. 1998;4(2):133-47 - PMID: 9584951 - DOI: 10.3109/13550289809114514

Panizzi P, Stone JR, Nahrendorf M

Endocarditis and molecular imaging.
J Nucl Cardiol. 2014;21(3):486-95 - PMID: 24797384 - PMCID: PMC4106242 - DOI: 10.1007/s12350-014-9902-8

Chang K, Jaffer F

Advances in fluorescence imaging of the cardiovascular system.
J Nucl Cardiol. 2008;15(3):417-28 - PMID: 18513648 - DOI: 10.1016/j.nuclcard.2008.03.001

Nahrendorf M, Abbate A, Narula J

Deciphering post-infarct inflammation: Should it heal, would it hurt?
J Nucl Cardiol. 2020;27(6):2100-2102 - PMID: 32086743 - DOI: 10.1007/s12350-020-02053-z

Nahrendorf M, Abbate A, Narula J

Correction to: Deciphering post-infarct inflammation: Should it heal, would it hurt?
J Nucl Cardiol. 2020;27(4):1384 - PMID: 32140993 - DOI: 10.1007/s12350-020-02090-8

Lin JR, Wang H, Collins AB, Stone JR

Tongue necrosis and systemic vascular amyloidosis.
Hum Pathol. 2011;42(5):734-737 - PMID: 21236468 - DOI: 10.1016/j.humpath.2010.08.011

Lin HY

Transforming Growth Factor-β and the Kidney Revisited: Introduction.
Semin Nephrol. 2012;32(3):225-7 - PMID: 22835452 - DOI: 10.1016/j.semnephrol.2012.04.010

Bouley R, Hasler U, Lu HA, Nunes P, Brown D

Bypassing vasopressin receptor signaling pathways in nephrogenic diabetes insipidus.
Semin Nephrol. 2008;28:266-78 - PMID: 18519087 - PMCID: PMC2494582 - DOI: 10.1016/j.semnephrol.2008.03.010

Brown D

Aquaporins and vasopressin signaling in kidney health and disease: introduction.
Semin Nephrol. 2008;28:215-6 - PMID: 18519082 - DOI: 10.1016/j.semnephrol.2008.03.001

Kim B, Breton S

Localization of the gap junction protein, connexin 43, and E-cadherin/Cadherin-1 in the proximal mouse epididymis.
Mol Reprod Dev. 2015;82(10):723 - PMID: 26331361

Yeung CH, Breton S, Setiawan I, Xu Y, Lang F, Cooper TG

Increased luminal pH in the epididymis of infertile c-ros knockout mice and the expression of sodium-hydrogen exchangers and vacuolar proton pump H+-ATPase.
Mol Reprod Dev. 2004;68(2):159-68 - PMID: 15095336 - DOI: 10.1002/mrd.20067

Ho NH, Weissleder R, Tung CH

Development of water-soluble far-red fluorogenic dyes for enzyme sensing
Tetrahedron. 2006;62:578-585

McCarthy JR, Capetta SH, Melfi PJ, Bruckner C

Use of Ag(II) as a removable ion in porphyrin chemistry: Diol cleavage products of [meso-tetraphenyl-2,3-diolchlorinato]Ag(II)
Tetrahedron. 2003;59:9137-46

Haimovich JS, Kolossváry M, Alam R, Padrós-Valls R, Lu MT, Aguirre AD

Risk stratification of chest pain in the emergency department using artificial intelligence applied to electrocardiograms.
Open Heart. 2025;12(2):ePub - PMID: 40889954 - PMCID: PMC12406858 - DOI: 10.1136/openhrt-2025-003343

Boiselle PM, Patz EF, Vining DJ, Weissleder R, Shepard JA, McLoud TC

Imaging of mediastinal lymph nodes: CT, MR, and FDG PET.
Radiographics. 1998;18(5):1061-9 - PMID: 9747607 - DOI: 10.1148/radiographics.18.5.9747607

Sahani DV, Bonaffini PA, Catalano OA, Guimaraes AR, Blake MA

State-of-the-Art PET/CT of the Pancreas: Current Role and Emerging Indications.
Radiographics. 2012;32(4):1133-58 - PMID: 22786999 - PMCID: PMC6939848 - DOI: 10.1148/rg.324115143

Wilbur DC, Madi K, Colvin RB, Duncan LM, Faquin WC, Ferry JA, Frosch MP, Houser SL, Kradin RL, Lauwers GY, Louis DN, Mark EJ, Mino-Kenudson M, Misdraji J, Nielsen GP, Pitman MB, Rosenberg AE, Smith RN, Sohani AR, Stone JR, Tambouret RH, Wu CL, Young RH, Zembowicz A, Klietmann W

Whole-slide imaging digital pathology as a platform for teleconsultation: a pilot study using paired subspecialist correlations.
Arch Pathol Lab Med. 2009;133(12):1949-53 - PMID: 19961250 - PMCID: PMC3694269 - DOI: 10.1043/1543-2165-133.12.1949

Louis DN, Gerber GK, Baron JM, Bry L, Dighe AS, Getz G, Higgins JM, Kuo FC, Lane WJ, Michaelson JS, Le LP, Mermel CH, Gilbertson JR, Golden JA

Computational pathology: an emerging definition.
Arch Pathol Lab Med. 2014;138(9):1133-8 - PMID: 25171694 - DOI: 10.5858/arpa.2014-0034-ED

Bogdanov A, Wright SC, Marecos EM, Bogdanova A, Martin C, Petherick P, Weissleder R

A long-circulating co-polymer in "passive targeting" to solid tumors.
J Drug Target. 1997;4(5):321-30 - PMID: 9169989 - DOI: 10.3109/10611869708995848

Salthouse CD, Weissleder R, Mahmood U

Development of a Time Domain Fluorimeter for Fluorescent Lifetime Multiplexing Analysis.
IEEE T Biomed Circuits Syst. 2008;2(3):204-211 - PMID: 19830273 - PMCID: PMC2760943 - DOI: 10.1109/TBCAS.2008.2003195

Merkulova M, McKee M, Dip PV, Gruber G, Marshansky V

N-terminal domain of the V-ATPase a2-subunit displays integral membrane protein properties.
Protein Sci. 2010;19(10):1850-1862 - PMID: 20669186 - PMCID: PMC2998721 - DOI: 10.1002/pro.470

Sullivan R, Légaré C, Lamontagne-Proulx J, Breton S, Soulet D

Revisiting structure/functions of the human epididymis.
Andrology. 2019;7(5):748-757 - PMID: 31033221 - DOI: 10.1111/andr.12633
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