Yeo MJ, Zhang O, Xie X, Nam E, Payne NC, Gosavi PM, Kwok HS, Iram I, Lee C, Li J, Chen NJ, Jiang H, Wang ZA, Lee K, Mao H, Harry SA, Barakat IA, Takahashi M, Waterbury AL, Barone M, Mattevi A, Bar-Peled L, Cole PA, Mazitschek R, Liau BB, Zheng N

Asymmetric Engagement of Dimeric CRL3 KBTBD4 by the Molecular Glue UM171 Licenses Degradation of HDAC1/2 Complexes.
bioRxiv. 2024;:ePub - PMID: 38798619 - PMCID: PMC11118476 - DOI: 10.1101/2024.05.14.593897

Xie X, Zhang O, Yeo MJR, Lee C, Harry SA, Paul L, Li Y, Payne NC, Nam E, Kwok HS, Jiang H, Mao H, Hadley JL, Lin H, Batts M, Gosavi PM, D'Angiolella V, Cole PA, Mazitschek R, Northcott PA, Zheng N, Liau BB

KBTBD4 Cancer Hotspot Mutations Drive Neomorphic Degradation of HDAC1/2 Corepressor Complexes.
bioRxiv. 2024;:ePub - PMID: 38798357 - PMCID: PMC11118371 - DOI: 10.1101/2024.05.14.593970

Payne NC, Ichikawa S, Woo CM, Mazitschek R

Protocol for the comprehensive biochemical and cellular profiling of small-molecule degraders using CoraFluor TR-FRET technology.
STAR Protoc. 2024;5(2):103129 - PMID: 38857155 - PMCID: PMC11193044 - DOI: 10.1016/j.xpro.2024.103129

Petrozziello T, Motlagh NJ, Monsanto RZB, Lei D, Murcar MG, Penney EB, Bragg DC, Fernandez-Cerado C, Legarda GP, Sy M, Muñoz E, Ang MC, Diesta CCE, Zhang C, Tanzi RE, Qureshi IA, Chen JW, Sadri-Vakili G

Targeting myeloperoxidase to reduce neuroinflammation in X-linked dystonia parkinsonism.
medRxiv. 2024;:ePub - PMID: 38978657 - PMCID: PMC11230314 - DOI: 10.1101/2024.06.25.24309481

Momin N, Pabel S, Rudra A, Kumowski N, Lee IH, Mentkowski K, Yamazoe M, Stengel L, Muse CG, Seung H, Paccalet A, Gonzalez-Correa C, Jacobs EB, Grune J, Schloss MJ, Sossalla S, Wojtkiewicz G, Iwamoto Y, McMullen P, Mitchell RN, Ellinor PT, Anderson DG, Naxerova K, Nahrendorf M, Hulsmans M

Therapeutic Spp1 silencing in TREM2 + cardiac macrophages suppresses atrial fibrillation.
bioRxiv. 2024;:ePub - PMID: 39149373 - PMCID: PMC11326243 - DOI: 10.1101/2024.08.10.607461

Quintana JM, Jiang F, Kang M, Valladolid Onecha V, Könik A, Qin L, Rodriguez VE, Hu H, Borges N, Khurana I, Banla LI, Le Fur M, Caravan P, Schuemann J, Bertolet A, Weissleder R, Miller MA, Ng TSC

Localized in vivo prodrug activation using radionuclides.
bioRxiv. 2024;:ePub - PMID: 39211146 - PMCID: PMC11361159 - DOI: 10.1101/2024.08.02.606075

Uygun K, von Reiterdank IF, Mojoudi M, Bento R, Taggart M, Dinicu A, Wojtkiewicz G, Coert J, van der Molen AM, Weissleder R, Parekkadan B

Ex Vivo Machine Perfusion as a Platform for Lentiviral Gene Delivery in Rat Livers.
Res Sq. 2024;:ePub - PMID: 39315250 - PMCID: PMC11419271 - DOI: 10.21203/rs.3.rs-4784505/v1

Wassenaar EC, Gorelick AN, Hung WT, Cheek DM, Kucukkose E, Lee IH, Blohmer M, Degner S, Giunta P, Wiezer RM, Raicu MG, Ubink I, Klaasen SJ, Lansu N, Watson EV, Corcoran RB, Boland G, Getz G, Kops GJ, Juric D, Lennerz JK, Boerma D, Kranenburg O, Naxerova K

A unique interplay of access and selection shapes peritoneal metastasis evolution in colorectal cancer.
bioRxiv. 2024;:ePub - PMID: 39386634 - PMCID: PMC11463674 - DOI: 10.1101/2024.09.25.614736

Di Ianni E, Jeon J, Hu H, Quintana JM, Lee C, Haidar EA, Mohammadi S, Zargani-Piccardi A, Mahamdeh M, Hernández IC, Ng TSC, Breyne K, Lee H, Breakefield XO, Miller MA

Enhanced mRNA delivery using ultrasound-delivered click reactive anchors.
bioRxiv. 2025;:ePub - PMID: 39975219 - PMCID: PMC11838329 - DOI: 10.1101/2025.01.28.635330

Tozzo V, Petherbridge R, James K, Hsu S, Michalopoulos C, Foy BH, Thaweethai T, Mow C, Maya J, Camero CB, Shook L, Gray KJ, Mauney L, Higgins JM, Powe CE

Hematologic dynamics during pregnancy and their association with obstetric complications: a retrospective cohort study.
medRxiv. 2025;:ePub - PMID: 39990572 - PMCID: PMC11844592 - DOI: 10.1101/2025.02.13.25322250

Gong D, Liu R, Cui Y, Rhodes M, Bae JW, Beechem JM, Hwang WL

Integrated spatial morpho-transcriptomics predicts functional traits in pancreatic cancer.
bioRxiv. 2025;:ePub - PMID: 40161804 - PMCID: PMC11952565 - DOI: 10.1101/2025.03.12.642933

Szafraniec HM, Bull F, Higgins JM, Stone HA, Krüger T, Pearce P, Wood DK

Suspension physics govern the multiscale dynamics of blood flow in sickle cell disease.
bioRxiv. 2025;:ePub - PMID: 40161781 - PMCID: PMC11952557 - DOI: 10.1101/2025.03.13.642599

Lloyd HC, Li Y, Payne N, Zhao Z, Xu W, Kroupova A, Zollman D, Long T, Kabir F, Chen M, Freeman R, Feng EY, Xi S, Hsu YC, Ciulli A, Mazitschek R, Woo CM

A method for the detection and enrichment of endogenous cereblon substrates.
bioRxiv. 2025;:ePub - PMID: 40196695 - PMCID: PMC11974815 - DOI: 10.1101/2025.03.24.645063

Tozzo V, Zhang LH, Ranganath R, Higgins JM

Transformer-based artificial intelligence on single-cell clinical data for homeostatic mechanism inference and rational biomarker discovery.
medRxiv. 2025;:ePub - PMID: 40196278 - PMCID: PMC11974774 - DOI: 10.1101/2025.03.24.25324556

Palanques-Tost E, Pallarès-López R, Padrós-Valls R, Song S, Reinertsen E, Churchill TW, Stockwell P, Pomerantsev E, Garasic J, Sundt TM, Shah P, Houstis NE, Aguirre AD

Cardiac Output Estimation in the Intensive Care Unit.
JACC Adv. 2025;4(5):101663 - PMID: 40286350 - PMCID: PMC12101535 - DOI: 10.1016/j.jacadv.2025.101663

Merz ML, Shoba VM, Pergu R, Severance ZC, Munkanatta Godage DNP, Deb A, Kwok HS, Singh P, Singh S, Allen JB, Tian W, Gosavi PM, Chaudhary SK, Anokhina V, Weisberg EL, Payne NC, He Y, Osadchey R, Shekhar M, Mazitschek R, Rees MG, Roth JA, Cui Q, Griffin JD, Liau BB, Choudhary A

Phosphorylation-inducing chimera rewires oncogenic kinase to trigger apoptosis.
bioRxiv. 2025;:ePub - PMID: 40661463 - PMCID: PMC12259158 - DOI: 10.1101/2025.06.13.659082

Williams DC, Higgins JM, Wood DK

Quantifying the unique mechanical properties of irreversibly sickled cells in sickle cell disease.
Blood Vessel Thromb Hemost. 2025;2(3):100077 - PMID: 40765910 - PMCID: PMC12320412 - DOI: 10.1016/j.bvth.2025.100077

Li J, Aguirre AD, Moura V, Jin J, Liu C, Zhong L, Sun C, Clifford G, Westover MB, Hong S

An Electrocardiogram Foundation Model Built on over 10 Million Recordings.
NEJM AI. 2025;2(7):ePub - PMID: 40771651 - PMCID: PMC12327759 - DOI: 10.1056/aioa2401033

Arbesfeld-Qiu JM, Cho JW, Nguyen PTT, Lester NA, Su J, Guo JA, Hoffman H, Shiau C, Caldwell N, Muratani S, Galvan M, Proctor JE, Ely Z, Wang S, Ganci M, Dries R, Hong T, Wo J, Boland G, Fernandez-Del Castillo C, Ferrone C, Heaphy CM, Zhang ML, Mino-Kenudson M, Hemberg M, Hwang WL

Distinct malignant cell states and myeloid glutamate signaling associated with aggressive pancreatic neuroendocrine tumors.
bioRxiv. 2025;:ePub - PMID: 40791359 - PMCID: PMC12338628 - DOI: 10.1101/2025.07.15.664730

Wang P, Lester N, Perrault E, Su J, Gong D, Shiau C, Cao J, Nguyen P, Bae JW, Olgun D, Hoffman H, Lam A, Huang-Gao J, Rahaman S, Guo J, Barth J, Caldwell N, Divakar P, Reeves J, Bahrami A, He S, Patrick M, Miller E, Ganci M, Cervantes-Jaramillo G, Hong T, Wo J, Roberts H, Weissleder R, Choi H, Fernandez-Del-Castillo C, Cormier K, Ting DT, Jacks T, Zheng L, Hemberg M, Mino-Kenudson M, Hwang WL

The Pdgfd-Pdgfrb axis orchestrates tumor-nerve crosstalk in pancreatic cancer.
bioRxiv. 2025;:ePub - PMID: 40909696 - PMCID: PMC12407889 - DOI: 10.1101/2025.08.26.672505

Hron BM, Ng TSC, Najafi Khosroshahi F, Kourmouzi V, Drubach LA, Voss S, Rosen RL, Packard A

In vitro radionuclide labeling characteristics of blenderized tube feeds for quantitative gastric motility assessment.
JPGN Rep. 2025;6(4):377-381 - PMID: 41245026 - PMCID: PMC12611584 - DOI: 10.1002/jpr3.70066

Cheek D, Blohmer M, Nowak M, Antal T, Naxerova K

Age distinguishes selection from causation in cancer genomes.
bioRxiv. 2025;:ePub - PMID: 41279109 - PMCID: PMC12632451 - DOI: 10.1101/2025.10.06.680730

Mohammadian M, Efthimiou N, Brusaferri L, Cooper-Hohn J, Kim M, Murphy JP, Alshelh Z, Grmek G, Schnieders JH, Chane CA, Carmichael TG, Yang D, Catana C, Stufflebeam SM, Edwards RR, Napadow V, Sullivan K, Nahrendorf M, Gilman JM, Loggia ML

Evidence for a role of skull bone marrow in human chronic pain as revealed by TSPO PET imaging.
medRxiv. 2025;:ePub - PMID: 41551382 - PMCID: PMC12809419 - DOI: 10.1101/2025.07.19.25331817

Pooladanda V, Xu R, Zarrella DT, Matoba Y, Shimada C, Kumar S, Kim E, Dibenedetto P, Qin X, Sarosiek KA, Krueger M, Magrassi N, Amiji M, Mohammadabadi MA, Winter U, Castro CM, Im H, Kumar R, Wang C, Dahl KDC, Nephew KP, Yeku OO, Milane LS, Rueda BR

Extracellular vesicles facilitate the horizontal transfer of drug resistance and stem-like properties between ovarian tumor cells.
bioRxiv. 2026;:ePub - PMID: 41648167 - PMCID: PMC12871660 - DOI: 10.64898/2026.01.20.699925

Ssedyabane F, Tusubira D, Niyonzima N, Najjuma JN, Randall TC, Kajabwangu R, Castro CM, Lee H, Ngonzi J

The likely possibility of predicting treatment outcomes of cervical lesions using serum FOXP3 and P16INK4A as shown by a cohort study in South Western Uganda.
Discov Oncol. 2026;17(1):ePub - PMID: 41691576 - PMCID: PMC13013885 - DOI: 10.1007/s12672-026-04670-5

Koscova Z, Li Q, Robichaux C, Junior VM, Ghanta M, Gupta A, Rosand J, Aguirre AD, Reinertsen E, Song S, Hong S, Albert DE, Xue J, Parekh A, Sameni R, Reyna MA, Westover MB, Clifford GD

The Harvard-Emory ECG Database.
Sci Data. 2026;13(1):ePub - PMID: 41741499 - PMCID: PMC13046864 - DOI: 10.1038/s41597-026-06861-9

Cai Zong, Kyumin Lim, Sierra A Walker, Rui Dai, Mi Ho Jeong, Reanna George, Jung Hyun Jo, Shams Iqbal, Hyungsoon Im, Ralph Weissleder

Do drugs with biliary toxicity cause cholangiocarcinoma?

Könik A, Auer B, Krauthammer SH, Ravi P, Ng TSC, Jacene HA

Fast [177Lu]Lu-PSMA SPECT/CT with dual-energy acquisition and Monte Carlo-based scatter correction.
EJNMMI Phys. 2026;:ePub - PMID: 41966673 - DOI: 10.1186/s40658-026-00864-6

Zong C, Lim K, Walker SA, Dai R, Jeong MH, George R, Jo JH, Iqbal S, Im H, Weissleder R

Do drugs with biliary toxicity cause cholangiocarcinoma?
bioRxiv. 2026;:ePub - PMID: 41959498 - PMCID: PMC13060385 - DOI: 10.64898/2026.03.31.715688

Rosenthal A, Jaffer FA, Ntziachristos V

Intravascular multispectral optoacoustic tomography of atherosclerosis: prospects and challenges.
Imaging Med. 2012;4(3):299-310 - PMID: 23144663 - PMCID: PMC3493570 - DOI: 10.2217/iim.12.20

Yui N, Lu HJ, Bouley R, Brown D

AQP2 is necessary for vasopressin- and forskolin-mediated filamentous actin depolymerization in renal epithelial cells.
Biol Open. 2011;1(2):101-8 - PMID: 23213402 - PMCID: PMC3507199 - DOI: 10.1242/bio.2011042

Vinegoni C, Lee S, Gorbatov R, Weissleder R

Motion compensation using a suctioning stabilizer for intravital microscopy
Intravital. 2012;1:115-121 - PMID: 24086796 - PMCID: PMC3786172 - DOI: 10.4161/intv.23017

Alt C, Runnels J, Teo G, Lin C

In vivo tracking of hematopoietic cells in the retina of chimeric mice with a scanning laser ophthalmoscope
Intravital. 2012;1:132-140

Hedgire SS, Oei TN, McDermott S, Cao K, Patel M Z, Harisinghani MG

Multiparametric magnetic resonance imaging of prostate cancer.
Indian J Radiol Imaging. 2012;22(3):160-9 - PMID: 23599562 - PMCID: PMC3624737 - DOI: 10.4103/0971-3026.107176

Cortez-Retamozo V, Engblom C, Pittet MJ

Remote control of macrophage production by cancer.
OncoImmunology. 2013;2(5):e24183 - PMID: 23762799 - PMCID: PMC3667905 - DOI: 10.4161/onci.24183

Phillips JA, Mortensen LJ, Ruiz JP, Sridharan R, Kumar S, Torres M, Sharma P, Lin CP, Karp JM, Hauschka PV

Advances in Single-cell Tracking of Mesenchymal Stem Cells (MSCs) During Musculoskeletal Regeneration.
Orthop J Harv Med Sch. 2012;14:22-28 - PMID: 24244929 - PMCID: PMC3824625

Coffey SE, Giedt RJ, Weissleder R

Automated analysis of clonal cancer cells by intravital imaging.
Intravital. 2013;2(3):ePub - PMID: 24349895 - PMCID: PMC3859690 - DOI: 10.4161/intv.26138

Schietinger A, Arina A, Liu RB, Wells S, Huang J, Engels B, Bindokas V, Bartkowiak T, Lee D, Herrmann A, Piston DW, Pittet MJ, Lin PC, Zal T, Schreiber H

Longitudinal confocal microscopy imaging of solid tumor destruction following adoptive T cell transfer.
OncoImmunology. 2013;2(11):e26677 - PMID: 24482750 - PMCID: PMC3895414 - DOI: 10.4161/onci.26677

Liu CL, Bernstein BE, Schreiber SL

Whole Genome Amplification by T7-Based Linear Amplification of DNA (TLAD): I. CIP Treatment of Samples and Tailing Reaction with Terminal Transferase.
CSH Protoc. 2008;2008:pdb.prot5002 - PMID: 21356834 - DOI: 10.1101/pdb.prot5002

Baron JM, Dighe AS, Arnaout R, Balis UJ, Black-Schaffer WS, Carter AB, Henricks WH, Higgins JM, Jackson BR, Kim J, Klepeis VE, Le LP, Louis DN, Mandelker D, Mermel CH, Michaelson JS, Nagarajan R, Platt ME, Quinn AM, Rao L, Shirts BH, Gilbertson JR

The 2013 symposium on pathology data integration and clinical decision support and the current state of field.
J Pathol Inform. 2014;5:2 - PMID: 24672737 - PMCID: PMC3952400 - DOI: 10.4103/2153-3539.126145

Da Silva N, Meyer-Monard S, Menot ML, Parrado A, Lebel A, Balitrand N, Fenaux P, Micléa JM, Rousselot P, Degos L, Dombret H, Chomienne C

Functional G-CSF pathways in t(8;21) leukemic cells allow for differentiation induction and degradation of AML1-ETO.
Hematol J. 2002;1(5):316-28 - PMID: 11920209 - DOI: 10.1038/sj.thj.6200047

Shelley CS, Da Silva N, Teodoridis JM

During U937 monocytic differentiation repression of the CD43 gene promoter is mediated by the single-stranded DNA binding protein Pur alpha.
Br J Haematol. 2001;115(1):159-66 - PMID: 11722429 - DOI: 10.1046/j.1365-2141.2001.03066.x

Shelley CS, Da Silva N, Georgakis A, Chomienne C, Arnaout MA

Mapping of the human CD11c (ITGAX) and CD11d (ITGAD) genes demonstrates that they are arranged in tandem separated by no more than 11.5 kb.
Genomics. 1998;49(2):334-6 - PMID: 9598326 - DOI: 10.1006/geno.1998.5232

Da Silva N, Meyer-Monard S, Menot ML, Degos L, Baruchel A, Dombret H, Chomienne C

G-CSF activates STAT pathways in Kasumi-1 myeloid leukemic cells with the t(8; 21) translocation: basis for potential therapeutic efficacy.
Cytokines Cell Mol Ther. 1997;3(2):75-80 - PMID: 9287246

Ali M, Pulli B, Chen JW

Molecular imaging of macrophage enzyme activity in cardiac inflammation.
Curr Cardiovasc Imaging Rep. 2014;7(4):9258 - PMID: 24729833 - PMCID: PMC3979571 - DOI: 10.1007/s12410-014-9258-0

Core AB, Canali S, Babitt JL

Hemojuvelin and bone morphogenetic protein (BMP) signaling in iron homeostasis.
Front Pharmacol. 2014;5:104 - PMID: 24860505 - PMCID: PMC4026703 - DOI: 10.3389/fphar.2014.00104

Wang CY, Meynard D, Lin HY

The role of TMPRSS6/matriptase-2 in iron regulation and anemia.
Front Pharmacol. 2014;5:114 - PMID: 24966834 - PMCID: PMC4053654 - DOI: 10.3389/fphar.2014.00114

Ausiello D, Shaw S

Quantitative human phenotyping: the next frontier in medicine.
Trans Am Clin Climatol Assoc. 2014;125:219-28 - PMID: 25125736 - PMCID: PMC4112685

Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP

Higher plasma vitamin D is associated with reduced risk of Clostridium difficile infection in patients with inflammatory bowel diseases.
Aliment Pharmacol Ther. 2014;39(10):1136-42 - PMID: 24641590 - PMCID: PMC4187206 - DOI: 10.1111/apt.12706

Mietto C, Pinciroli R, Piriyapatsom A, Thomas JG, Bry L, Delaney ML, Du Bois A, Truelove J, Ackman JB, Wojtkiewicz GR, Nahrendorf M, Kacmarek RM, Berra L

Tracheal Tube Obstruction in Mechanically Ventilated Patients Assessed by High-resolution Computed Tomography.
Anesthesiology. 2014;121(6):1226-1235 - PMID: 25254903 - DOI: 10.1097/ALN.0000000000000455
3281 CSV HTML